项目作者: ddbj

项目描述 :
Workflows written in common workflow language (CWL) for testing SAPPORO.
高级语言: Common Workflow Language
项目地址: git://github.com/ddbj/SAPPORO_test_workflow.git
创建时间: 2019-04-21T14:18:03Z
项目社区:https://github.com/ddbj/SAPPORO_test_workflow

开源协议:Apache License 2.0

下载


SAPPORO Test Workflow

Workflows written in common workflow language (CWL) for testing SAPPORO

Run a workflow

(Plesae see how to install cwltool: https://github.com/common-workflow-language/cwltool)

To run a workflow named workflow/trimming_and_qc/trimming_and_qc, type as follows:

  1. $ cwltool --outdir output ./workflow/trimming_and_qc/trimming_and_qc_no_upload/trimming_and_qc_no_upload.cwl ./test/workflow/job/trimming_and_qc_no_upload.yml

Visualize trimming_and_qc_no_upload.cwl

(Visualize at 2019-1-20 using CWL Viewer https://view.commonwl.org)

trimming_and_qc_no_upload.cwl