Locates and labels crops in larger 3d images.
A tool that locates crops taken from medical images (tiffs), including rotated and resliced crops.
This tool is useful in a lab setting, for example, a crop is taken from a 3D tiff in Fiji, but the location is not recorded. Upload the original image and the crop to our tool, and it will locate the crop.
Visit https://we-gold.github.io/Crop-Locator-Tool/ for the web-based user interface.
For development purposes, this repository can be installed locally via the following steps.
npm install
npm run dev
to start a local server running the codeSee the project wiki for documentation.
This tool has been tested on modern versions of Chrome, Edge, and Firefox. It does not work on IE, and is untested on Safari.
The code is available under the MIT License.